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IRC log for #dataverse, 2018-01-29

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All times shown according to UTC.

Time S Nick Message
07:02 dataverse-user joined #dataverse
08:06 jri joined #dataverse
09:21 soU joined #dataverse
13:21 donsizemore joined #dataverse
14:53 pdurbin joined #dataverse
15:21 pameyer joined #dataverse
15:32 directxman12 joined #dataverse
15:46 pdurbin directxman12: welcome!
15:46 Michael92 joined #dataverse
15:47 pdurbin Michael92: welcome!
15:47 directxman12 pdurbin: thanks!
16:05 pameyer pdurbin: just FYI, https://jenkins.io/doc/book/managing/cli/ . I'm not sure about authentication (I've only used it with a local jenkins server that I had wide-open); but it might be worth a look for moving jobs from one jenkins server to another
16:08 pdurbin pameyer: interesting. Thanks. Let's definitely talk this out after standup (or whenever) some day that you're here. I'm trying to picture what the pull request looks like. Maybe an addition to the dev guide.
16:10 pameyer pdurbin: sounds like a plan
16:40 donsizemore joined #dataverse
16:48 andrewSC Hey guys, I'm looking at a specific dataset locally and when I try to edit the metadata via the UI I get "XML Parsing Error: not well-formed" within the browser console
16:48 andrewSC It's an older dataset (deposited last year feb)..
16:48 pdurbin andrewSC: yuck. What version of Dataverse?
16:49 andrewSC just upgraded to 4.8.5 but it was also happening in 4.8.4
16:49 andrewSC it's only this one dataset it seems.. lol
16:49 pameyer andrewSC: any special characters (or html-formatted text)?
16:49 andrewSC hmmm lemme see
16:53 andrewSC the description doesn't stick out as odd but it definitely looks like it could have been copy/pasted so very possible there's a special char in there
16:53 andrewSC pameyer: do you know which table the descriptions are kept in the db?
16:53 andrewSC there's a whitespace character at the end of the description i'd like to try and remove and see if that's the issue
16:54 pameyer andrewSC: not from memory, but I'll take a quick look
16:54 andrewSC tyty
16:54 pdurbin andrewSC: should be the "datasetfieldvalue" table: http://phoenix.dataverse.org/schemaspy/latest/tables/datasetfieldvalue.html
16:54 andrewSC boom
16:54 andrewSC kk gonna take a look now
16:55 pameyer pdurbin beat me to it :)
16:55 pdurbin andrewSC: is there a stacktrace in server.log?
16:55 andrewSC kinda surprising but I didn't see anything when i loaded the page
16:56 pdurbin andrewSC: huh. ok. can you please email a screenshot of the XML parsing error to support@dataverse.org?
16:56 andrewSC mhmm
16:57 pdurbin thanks
17:20 andrewSC yeah there's like form feed chars and crap in this
17:20 andrewSC lemme clean it up and see if it fixes it
17:25 pdurbin andrewSC: reminds me a bit of https://github.com/IQSS/dataverse/issues/787
17:27 andrewSC mhmmm
17:27 andrewSC yeah that was the fix, just updated the value in the db and refreshed the page
17:28 andrewSC everythings good again
17:28 pdurbin nice. good job, andrewSC
17:28 andrewSC :3
17:28 andrewSC I'll send the email over to support shortly
17:29 pdurbin andrewSC: or... you could make a pull request documenting your fix :)
17:29 pdurbin up to you
18:11 andrewSC pdurbin: haha welll, my fix was just to do an UPDATE and SET with the data I cleaned by hand.. so there wasn't really any code change? I did save the text that caused an issue though.
18:14 pameyer andrewSC: I think pdurbin's thinking about seeing if it's fixed, and/or making sure that the text doesn't need to be cleaned by diving into the db
18:14 pameyer good that it's fixed for you thought :)
18:15 andrewSC ohhh I see, a PR rather than a GH issue?
18:16 pdurbin andrewSC: actually a github issue first is better. to describe the problem
18:16 pameyer more like having the info for a GH issue - it might already be fixed, or it might be something to check
18:16 andrewSC mmmm gotcha gotcha
18:16 andrewSC yeah I can definitely do that :)
18:17 pdurbin you could upload your screeshot to the github issue you create, as long as it's ok that the screenshot is public
18:17 andrewSC I think it is--it's just the actual error in the web console.. The text with the escape characters I will need to change though.
18:50 donsizemore joined #dataverse
18:51 donsizemore @pdurbin afternoon - is there a moratorium on documentation updates pending redesign, or may i submit a PR?
18:55 pdurbin donsizemore: you can *always* send us pull requests. :) What redesign? :)
18:56 donsizemore @pdurbin er, maybe restructuring. on friday afternoon i did a manual installation from the guide, and there are some things i'd like to make more clear or otherwise tweak. just language and examples, really
18:57 pdurbin Gotcha. I forget, did I create a new Google doc to start a reorg? Maybe I just talked about the old one.
19:00 andrewSC https://github.com/IQSS/dataverse/issues/4442
19:01 andrewSC I believe I followed all the rules within the contributor guidelines--definitely let me know if I need to add something
19:02 pameyer andrewSC: thanks
19:02 pameyer interesting - control characters
19:02 andrewSC mhmmm..
19:02 andrewSC http://donsnotes.com/tech/charsets/ascii.html
19:02 donsizemore @pdurbin I thought Derek was doing it? I dunno. Just didn't want to do touch-ups when there's demo on the way
19:02 andrewSC surprised me tbq
19:02 pdurbin andrewSC: thanks. The error looks different than I expected. You might want to edit what you wrote and add the version of Dataverse.
19:03 andrewSC s/tbq/tbqh/
19:03 andrewSC definitely
19:03 pdurbin andrewSC: do you know if it's possible to reproduce with a fresh dataset?
19:04 andrewSC hmmmm
19:17 andrewSC So I tried it with unicode escape characters and couldn't get it to replicate
19:24 pameyer that might be a good sign
19:28 pdurbin So maybe it only applies to data that was added in older versions of Dataverse?
19:33 andrewSC That's honestly what I'm thinking...
19:48 pdurbin Ok. I guess we should decide what to do with that issue.
19:48 andrewSC hahah
19:49 andrewSC I personally don't think it's entirely unreasonable to just close it out. I feel like if people were experiencing it in a non-marginal way you guys would be seeing it pop up more..
19:52 pdurbin yeah
19:53 pdurbin hopefully not too many people are affected
20:07 andrewSC mhmm
20:11 pdurbin I mean, we could use that issue to document the fix you applied. In the Admin Guide, maybe. But if it's a rare bug maybe it's not worth documenting.
22:16 andrewSC yeahh

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Connect via chat.dataverse.org to discuss Dataverse (dataverse.org, an open source web application for sharing, citing, analyzing, and preserving research data) with users and developers.