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14:01 pdurbin
andrewSC bricas_ jri: Dataverse 4.9.2 is out: https://github.com/IQSS/dataverse/releases/tag/v4.9.2
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14:48 andrewSC
pdurbin: nice!! I'm still on 4.8.5 however once I've gotten the OAuth2 uri collision resolved with our proxy/env I'll be cruising right up to latest :)
14:49 pdurbin
Yikes. Good luck.
14:49 andrewSC
hahah
14:49 andrewSC
thanksss
14:51 pdurbin
If there's something we can do to help, please let us know.
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14:55 pdurbin
pameyer: thanks for linking to the new 4.9.2 feature of importing datasets with existing DOIs: https://groups.google.com/d/msg/dataverse-community/ax0ytpGFMck/Hj7Bb6YuDgAJ . It was on my list to mention this. :)
14:57 pameyer
pdurbin: I'd been about to mention that it was merged not released... then I heard 4.9.2 was immanent
14:57 pameyer
I might've jumped the gun on the release announcement thought - guides doesn't have `/latest` pointing to 4.9.2
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14:59 pdurbin
I always link to specific release numbers anyway. In the Guides. Because we may rearrange pages in the future.
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15:12 pdurbin
pameyer: in docker-dcm, what port does DCM run on? And can I get at it from my Mac?
15:16 pameyer
pdurbin: 80 and 22, and no
15:16 pameyer
that's why there's a client container
15:20 pameyer
if you wanted to, you could probably change the forwarding in the compose file. why?
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15:29 pdurbin
pameyer: I'd like to be able to use my normal development workflow of editing files in ~/NetbeansProjects/dataverse on my Mac, autodeploy to Glassfish running on my Mac (on save). The only difference from normal is that I want/need to configure :DataCaptureModuleUrl to point at either the mock running on my Mac or (localhost:5000) or docker-dcm on whatever port Glassfish on my Mac can reach. I hope that
15:29 pdurbin
makes sense!
15:31 pameyer
sounds like just the API port, right?
15:31 pdurbin
yeah, ur.py or whatever
15:32 pameyer
adding a `ports` line with `$your_favorite_local_port:80` under dcmsrv should do it
15:32 pameyer
won't get you a shared filesystem though
15:44 pdurbin
pameyer: in the compose file?
15:45 pameyer
conf/docker-dcm/docker-compose.yml
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15:51 pdurbin
cool, thanks!
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16:33 pameyer
oddness - integration tests pass, trying to create a dataset with the native API fails
16:36 pdurbin
pameyer: on "develop"? d77cb88?
16:38 pameyer
d77cb88321f6910cfeae889203f6b0225e59f9ac
16:38 pameyer
aka - yeah
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16:39 pameyer
saw it initially w\ docker-dcm; wiped things out and saw it without the DCM configs
16:39 pameyer
I'm still testing w\ ezid; and first pass at the logs suggests its sending a bad target url
16:40 pameyer
still investigating though
16:40 pdurbin
Ok. I haven't built that commit on the phoenix server. I just kicked off a build. Thanks for the heads up.
16:43 pameyer
integration tests, which presumably test creating a dataset with the native API , are passing for me
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16:52 pdurbin
pameyer: integration tests are passing on phoenix as well: https://build.hmdc.harvard.edu:8443/job/phoenix.dataverse.org-apitest-develop/223/
16:53 pameyer
so that's consistent
16:54 pdurbin
pameyer: you are welcome to try to create a dataset via native api on the phoenix server if you like
16:56 pameyer
pdurbin: usual test API key?
16:57 pameyer
or do I need to setup an account first?
16:57 pdurbin
you'd need to create an account
16:58 pdurbin
there is no usual API key. new keys are created on every build. dropping the database happens early
16:59 pameyer
thanks - I may tried that depending on what the debugger tells me
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17:00 pdurbin
ok
17:00 pameyer
ahh - `https://ce470b6229d4/citation?persistentId=doi:10.5072/FK2/EHXOLK `
17:03 pdurbin
what is https://ce470b6229d4 ?
17:04 pameyer
that's the container internal hostname
17:05 pameyer
that puzzles me less than the `citation` in the target URL
17:05 pdurbin
I'm completely puzzled now.
17:07 pameyer
I'm pretty confused too, and starting to think that I won't get it sorted before lunch.
17:07 pameyer
integration tests passing suggest that target URLs for DOIs are valid from within docker
17:08 pdurbin
I thought you couldn't create a dataset via native api.
17:08 pameyer
non-interactive install in docker shows invalid target URLs being created (resulting in a dataset creation failure), and somehow "citation" gets inserted into the target url instead of dataset.xhtml
17:08 pameyer
pdurbin: *I* can't, but the *integration tests* can
17:09 pameyer
so yeah; puzzeling
17:09 pdurbin
¯\_(ツ)_/¯
17:11 pameyer
http://phoenix.dataverse.org/dataset.xhtml?persistentId=doi:10.5072/FK2/Q1516N&version=DRAFT
17:12 pameyer
hmm.... setupIT vs normal installation; and DataCite vs EZID
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17:15 pdurbin
What's a target URL ?
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17:16 pameyer
what the DOI resolves to
17:16 pdurbin
ah, thanks
17:16 pameyer
aka - `curl -I https://doi.org/$doi ` shows a redirect to that URL
17:18 pameyer
still puzzled; but leaning towards the site URL
17:18 pdurbin
man, I'm gonna start using -I instead of -i. thanks
17:19 pdurbin
I don't think I control any servers that create real target URLs. Both of mine are test servers.
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17:20 pdurbin
test DOIs with FK2 shoulders and all that
17:22 pameyer
ezid test has the target you give it, datacite test dois always resolve to the same identifier
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17:24 pameyer
... and yeah, will not get un-confused before lunch
17:24 pdurbin
yeah https://doi.org/10.5072/FK2/IT02CG redirects to http://www.datacite.org/testprefix so I can't see if "citation" is being added or not.
17:25 pameyer
> stop in edu.harvard.iq.dataverse.DOIEZIdServiceBean.createIdentifier Set breakpoint edu.harvard.iq.dataverse.DOIEZIdServiceBean.createIdentifier > Breakpoint hit: "thread=jk-connector(4)", edu.harvard.iq.dataverse.DOIEZIdServiceBean.createIdentifier(), line=249 bci=0 249 logger.log(Level.FINE, "createIdentifier"); jk-connector(4)[1] next > Step completed: "thread=jk-connector(4)", edu.harvard.iq.dataverse.DOIEZIdServiceBean.cr
17:26 pameyer
that had newlines before I pasted it :(
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17:31 pdurbin
Is it a problem that "citation" is in the target URL ?
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17:59 pameyer
not sure; leaning towards not the source of the problem
18:03 pdurbin
As I mentioned in Slack, it's been there since Dataverse 4.4: https://github.com/IQSS/dataverse/commit/96c8bdfb
18:03 pameyer
yeah - thanks
18:04 pameyer
I'd thought it was there to facilitate resolving file DOIs vs dataset DOIs, but it doesn't appear to be doing that
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18:05 pdurbin
It's hard to tell. The pull request is linked to many issues.
18:08 pdurbin
pameyer: I'm using the DCM mock, by the way. Seems to work fine for my needs so far.
18:10 pameyer
pdurbin: good to hear. and siteUrl was the problem
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18:13 pdurbin
pameyer: did you see https://github.com/IQSS/dataverse/pull/4887/files ? :)
18:14 pameyer
one of the reasons why it should've occured to me sooner
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19:56 pdurbin
pameyer: oh, do you feel like exposing that port in 4940 while you're in there?
19:57 pameyer
what's that one do?
19:58 pdurbin
it's docker-dcm so related. somewhat :)
19:59 pameyer
?
19:59 pdurbin
nevermind
20:00 pdurbin
if i ever try to use docker-dcm maybe I'll expose the port like you advised above. for now I'm using the mock
20:00 pameyer
whatever works
20:00 pdurbin
yeah
20:01 pameyer
I'll probably be back into docker-dcm at somepoint, but pretty much done for today
20:05 pdurbin
ok, no worries
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22:04 pameyer
was taking a quick look at https://github.com/IQSS/dataverse-ansible/issues/20; figured I'd try re-running that role in vagrant
22:04 pameyer
`Box 'sjoeboo/centos-7-1-x86-ansible' could not be found` :(
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