| Time | 
            S | 
            Nick | 
            Message | 
        
        
| 00:00 | 
     | 
 | 
shubh joined #dvn | 
        
| 00:33 | 
     | 
pdurbin | 
sbmarks: ah, you were cheating! ;) | 
        
| 00:33 | 
     | 
pdurbin | 
shubh: hi! | 
        
| 02:55 | 
     | 
 | 
shubh left #dvn | 
        
| 03:00 | 
     | 
 | 
shubh joined #dvn | 
        
| 03:02 | 
     | 
shubh | 
Hi! Anyone here? :) | 
        
| 03:07 | 
     | 
pdurbin | 
here but it's late :) | 
        
| 03:07 | 
     | 
pdurbin | 
shubh: you're from the future aren't you? :) | 
        
| 03:07 | 
     | 
pdurbin | 
it's still wednesday here | 
        
| 03:08 | 
     | 
shubh | 
aah, its Thursday here, 4 Pm to be exact. :) | 
        
| 03:10 | 
     | 
shubh | 
Its great to read the logs here and learn as to how developers at Dataverse work and share their ideas. :) | 
        
| 03:13 | 
     | 
shubh | 
I however am still stuck with the same issue of trying to find a solution to the HTML error bug, is it possible to fix it for the 3.3 version? | 
        
| 03:15 | 
     | 
pdurbin | 
you're talking about https://groups.google.com/d/topic/dataverse-community/jGnGVPI5BVU/discussion | 
        
| 03:16 | 
     | 
pdurbin | 
which i *think* is this bug: https://redmine.hmdc.harvard.edu/issues/2729 | 
        
| 03:18 | 
     | 
pdurbin | 
i'm looking at an email from a team member from Jan. 28. he seems to know how to fix this (but i don't) | 
        
| 03:18 | 
     | 
pdurbin | 
shubh: can you please email your question to dvn_support help.hmdc.harvard.edu ? | 
        
| 03:18 | 
     | 
pdurbin | 
this will give you a ticket number for tracking | 
        
| 03:19 | 
     | 
shubh | 
Allright, will do. Thanks. :) | 
        
| 03:19 | 
     | 
pdurbin | 
yep :) | 
        
| 03:20 | 
     | 
shubh | 
And i was wondering that is there any way to automate the process of uploading the data in dataverse? | 
        
| 03:22 | 
     | 
pdurbin | 
well, we have a new feature as of 3.3 that allows you to upload a zip file | 
        
| 03:22 | 
     | 
pdurbin | 
and the zip file can contain many files | 
        
| 03:23 | 
     | 
pdurbin | 
people seem to like it | 
        
| 03:23 | 
     | 
pdurbin | 
there might be other solutions as well that i'm not aware of. i've only been on the team a couple months | 
        
| 03:24 | 
     | 
pdurbin | 
you could check http://guides.thedata.org or email the list or open a separate support ticket for this | 
        
| 03:28 | 
     | 
shubh | 
Oh all right. will do that as well. Thanks a lot again, good night :) | 
        
| 15:07 | 
     | 
 | 
uutrecht joined #dvn | 
        
| 15:07 | 
     | 
uutrecht | 
hello Philip are you there? | 
        
| 15:08 | 
     | 
uutrecht | 
I am having a hard time getting the build environment for dvn running | 
        
| 15:08 | 
     | 
pdurbin | 
uutrecht: yes. hi! | 
        
| 15:08 | 
     | 
uutrecht | 
great you're there :) | 
        
| 15:09 | 
     | 
pdurbin | 
i think i'm going to start publishing "feature branches" on github | 
        
| 15:09 | 
     | 
uutrecht | 
i try to build the project but i keep getting erros on a missing /root/NetBeansProjects/dvn/src/DVN-ingest/src/edu/harvard/iq/dvn/ingest/org/thedata/statdataio/metadata/SDIOMetadata.java:25: error: package org.apache.commons.lang does not exist import org.apache.commons.lang.StringEscapeUtils; | 
        
| 15:10 | 
     | 
uutrecht | 
i am sure i added the library as a read in the developer guide | 
        
| 15:12 | 
     | 
pdurbin | 
under Tools -> Ant Libraries | 
        
| 15:12 | 
     | 
pdurbin | 
ICEfaces Components (2.0.2) | 
        
| 15:12 | 
     | 
pdurbin | 
do you see nbinst://org.netbeans.libs.commons_logging/modules/ext/commons-logging-1.1.jar ? | 
        
| 15:12 | 
     | 
pdurbin | 
(this was red for me) | 
        
| 15:12 | 
     | 
pdurbin | 
i removed it | 
        
| 15:13 | 
     | 
pdurbin | 
then i clicked "Add JAR/folder" and added ~/NetBeansProjects/dvn/lib/dvn-lib-WEB/commons-logging.jar instead | 
        
| 15:13 | 
     | 
pdurbin | 
that was for 'Reference Problems: "icefaces2-ice" library (in DVN-web) has missing items' | 
        
| 15:14 | 
     | 
pdurbin | 
which may not be your problem :/ | 
        
| 15:14 | 
     | 
uutrecht | 
yes its red | 
        
| 15:15 | 
     | 
pdurbin | 
uutrecht: are you Hans? from ticket 153048? | 
        
| 15:16 | 
     | 
uutrecht | 
regarding the filetypes? | 
        
| 15:16 | 
     | 
pdurbin | 
"#153048: checking out to netbeans" | 
        
| 15:16 | 
     | 
uutrecht | 
yes regaring git and the 3.3 | 
        
| 15:17 | 
     | 
pdurbin | 
ok :) | 
        
| 15:17 | 
     | 
pdurbin | 
nice to meet you :) | 
        
| 15:17 | 
     | 
uutrecht | 
thanks :) | 
        
| 15:17 | 
     | 
uutrecht | 
i am just restarting the netbeans | 
        
| 15:19 | 
     | 
uutrecht | 
ok the reference problem is gone. but i stell have the org.apache.commons.lang erros | 
        
| 15:19 | 
     | 
pdurbin | 
hmm. well, *some* progress... | 
        
| 15:19 | 
     | 
uutrecht | 
this import goes wrong: /root/NetBeansProjects/dvn/src/DVN-ingest/src/edu/harvard/iq/dvn/ingest/org/thedata/statdataio/metadata/SDIOMetadata.java:25: error: package org.apache.commons.lang does not exist import org.apache.commons.lang.StringEscapeUtils; | 
        
| 15:20 | 
     | 
pdurbin | 
do you have the DVN-ingest project open? | 
        
| 15:21 | 
     | 
uutrecht | 
just web i see | 
        
| 15:21 | 
     | 
uutrecht | 
open them all | 
        
| 15:21 | 
     | 
pdurbin | 
"NetBeans should detect 5 projects. Click Open Project. Select DVN-web and check Open Required (so that DVN-ingest is also opened) and click Open." -- http://dvn.github.com/dvn-sourceforge2github/dvn-dev-on-github/quickstart/ | 
        
| 15:21 | 
     | 
pdurbin | 
DVN-ingest is required | 
        
| 15:22 | 
     | 
uutrecht | 
dont see the open required option | 
        
| 15:22 | 
     | 
pdurbin | 
yeah, i think you only see it when you first do a clone... | 
        
| 15:23 | 
     | 
pdurbin | 
but you can open it after the fact | 
        
| 15:23 | 
     | 
pdurbin | 
File -> Open Project | 
        
| 15:23 | 
     | 
uutrecht | 
if I select the DVN-ingest it just goes down into that folder | 
        
| 15:25 | 
     | 
pdurbin | 
in /root/NetBeansProjects/dvn/src ? | 
        
| 15:26 | 
     | 
uutrecht | 
yes i see i was in the wrong folder | 
        
| 15:28 | 
     | 
uutrecht | 
ok i open the 5 projects | 
        
| 15:28 | 
     | 
uutrecht | 
now i have new reference problems | 
        
| 15:28 | 
     | 
uutrecht | 
lockss-daemon library could not be found | 
        
| 15:29 | 
     | 
pdurbin | 
buh | 
        
| 15:30 | 
     | 
* pdurbin | 
looks at http://dvn.github.com/dvn-sourceforge2github/dvn-dev-on-github/quickstart/ | 
        
| 15:30 | 
     | 
pdurbin | 
i don't think I've seen that | 
        
| 15:31 | 
     | 
uutrecht | 
maby the order of the projects is wrong | 
        
| 15:31 | 
     | 
pdurbin | 
hmm. i don't *think* that matters... | 
        
| 15:31 | 
     | 
pdurbin | 
you might want to try deleting everything and starting over using http://dvn.github.com/dvn-sourceforge2github/dvn-dev-on-github/quickstart/ | 
        
| 15:32 | 
     | 
uutrecht | 
the project uses a class library called lockss-daemon | 
        
| 15:32 | 
     | 
pdurbin | 
that's just a temporary guide, by the way, i'll merge it into http://guides.thedata.org some day | 
        
| 15:33 | 
     | 
pdurbin | 
hmm, i see ${libs.lockss-daemon.classpath} at src/DVN-lockss/nbproject/project.properties | 
        
| 15:35 | 
     | 
* pdurbin | 
calls for reinforcements | 
        
| 15:37 | 
     | 
pdurbin | 
uutrecht: can you build anyway? | 
        
| 15:38 | 
     | 
uutrecht | 
no it gives errors on icefaces | 
        
| 15:38 | 
     | 
pdurbin | 
what's the error, please? | 
        
| 15:38 | 
     | 
pdurbin | 
oh oh | 
        
| 15:38 | 
     | 
pdurbin | 
wait | 
        
| 15:38 | 
     | 
uutrecht | 
error package irg.icefaces.components.fileentry does not exist | 
        
| 15:39 | 
     | 
pdurbin | 
you opened all 5 projects? | 
        
| 15:39 | 
     | 
pdurbin | 
you only need 2 projects open: DVN-web and DVN-ingest | 
        
| 15:39 | 
     | 
uutrecht | 
EAR, EJB, ingest lockss, web | 
        
| 15:39 | 
     | 
pdurbin | 
can you please close the others? | 
        
| 15:40 | 
     | 
uutrecht | 
BUILD SUCCESFUL | 
        
| 15:40 | 
     | 
uutrecht | 
great | 
        
| 15:40 | 
     | 
pdurbin | 
\o/ | 
        
| 15:41 | 
     | 
uutrecht | 
can i run it in glassfish? | 
        
| 15:44 | 
     | 
pdurbin | 
sorry, one sec | 
        
| 15:44 | 
     | 
pdurbin | 
uutrecht: how does this look? should only have 2 projects open · fc56ea5 · dvn/dvn-sourceforge2github - https://github.com/dvn/dvn-sourceforge2github/commit/fc56ea5d3f4963b6d2a8fc48f62e6bf524212218 | 
        
| 15:47 | 
     | 
uutrecht | 
ok thx i should have been a bit more precise with the instruction thx for the help | 
        
| 15:48 | 
     | 
pdurbin | 
credit for leonid for noticing you said you opened all 5 projects :) | 
        
| 15:55 | 
     | 
pdurbin | 
uutrecht: you can go ahead and try it on glassfish. sure | 
        
| 15:55 | 
     | 
uutrecht | 
hold for a sec :) maby i found another problem | 
        
| 15:57 | 
     | 
uutrecht | 
i see a ! on optionspage | 
        
| 15:57 | 
     | 
uutrecht | 
utilities page | 
        
| 15:57 | 
     | 
uutrecht | 
and addfiles page | 
        
| 15:58 | 
     | 
uutrecht | 
regarding import org.icefaces.component.fileentry | 
        
| 15:59 | 
     | 
uutrecht | 
i had a build succesfull that was probably because i had dvn-ingest selected | 
        
| 16:00 | 
     | 
uutrecht | 
there is still a remaining issue with icefaces | 
        
| 16:01 | 
     | 
uutrecht | 
it's all on the icefaces import | 
        
| 16:05 | 
     | 
pdurbin | 
hmm | 
        
| 16:07 | 
     | 
pdurbin | 
did you install the icefaces plugin? http://guides.thedata.org/book/2-install-icefaces-20-libraries-and-netbeans-plugins | 
        
| 16:38 | 
     | 
pdurbin | 
i think i'd like to change that to tell everyone to get the icefaces jars from http://anonsvn.icesoft.org/repo/maven2/releases/ rather than http://dvn.iq.harvard.edu/dev/icefaces/ICEfaces-2.0.2-Netbeans-7.0.zip though. see also https://github.com/IQSS/iqss-javaee-template/commit/b4f197daf5cab2f91526f7953b384e6b69f42c40#examples/web/hello1/pom.xml where icefaces 2.0.2 is added | 
        
| 17:18 | 
     | 
uutrecht | 
ok so when i get those icesfaces, i still need to edit the pom? | 
        
| 17:18 | 
     | 
pdurbin | 
um. no, sorry for the confusion | 
        
| 17:18 | 
     | 
pdurbin | 
pom.xml is for maven | 
        
| 17:18 | 
     | 
pdurbin | 
dvn is still using ant | 
        
| 17:19 | 
     | 
uutrecht | 
oh ok that is old.. | 
        
| 17:19 | 
     | 
pdurbin | 
(though we're thinking of switching: https://redmine.hmdc.harvard.edu/issues/2738 ) | 
        
| 17:19 | 
     | 
pdurbin | 
your best bet is to follow http://guides.thedata.org/book/2-install-icefaces-20-libraries-and-netbeans-plugins . that's what i do | 
        
| 17:19 | 
     | 
uutrecht | 
but i did use the harvard plugin | 
        
| 17:20 | 
     | 
pdurbin | 
and what errors are you seeing? | 
        
| 17:20 | 
     | 
uutrecht | 
ok then i take the upper link | 
        
| 17:20 | 
     | 
uutrecht | 
it is missing 'FileEntry' | 
        
| 17:21 | 
     | 
uutrecht | 
org.icefaces.component.... | 
        
| 17:21 | 
     | 
uutrecht | 
maby i need to change the iceface library someplace else? | 
        
| 17:25 | 
     | 
uutrecht | 
ok i checked under project and under and its the dvn/lib/dvn-lib-WEB version of commons-logging.jar | 
        
| 17:27 | 
     | 
pdurbin | 
you should see various icefaces stuff in Tools -> Ant Libraries | 
        
| 17:28 | 
     | 
uutrecht | 
i think its from acefaces-ace i'll add that one | 
        
| 17:29 | 
     | 
pdurbin | 
great | 
        
| 17:31 | 
     | 
uutrecht | 
i am using jdk 7 it complains about bootstrap 1.6 this is fixed when i use jdk 6. does it matter? | 
        
| 17:34 | 
     | 
pdurbin | 
hmm, not sure | 
        
| 17:34 | 
     | 
pdurbin | 
i need to step out but the FileEntry thing might happen if you don't run the installer: http://guides.thedata.org/book/0-automated-installer-new-v30 | 
        
| 17:35 | 
     | 
pdurbin | 
"./install-dev" | 
        
| 17:37 | 
     | 
uutrecht | 
it did build now | 
        
| 17:37 | 
     | 
uutrecht | 
but i got a message could not load dependand class for jdepend, planarimage and mavenrepository | 
        
| 17:39 | 
     | 
uutrecht | 
if i want to run the new war file i need the sql reference data for 3.4? | 
        
| 18:22 | 
     | 
pdurbin | 
so your build was successful. that's good. you have a war file | 
        
| 18:23 | 
     | 
pdurbin | 
now you need an "application environment" which is glassfish plus postgresql, at minimum | 
        
| 18:26 | 
     | 
pdurbin | 
uutrecht: is this your first time setting up a dev environment for dvn? | 
        
| 18:50 | 
     | 
pdurbin | 
oh, before i forget, we replied to shubh (above) in ticket 153472. the workaround is to fix the html in the database. will be fixed in 3.4 | 
        
| 21:26 | 
     | 
pdurbin | 
getVarHitIds() returns studyIds for variable query - https://github.com/IQSS/dvn/blob/3.3/src/DVN-EJB/src/java/edu/harvard/iq/dvn/core/index/Indexer.java#L921 | 
        
| 21:28 | 
     | 
pdurbin | 
(just me thinking about solr): https://redmine.hmdc.harvard.edu/issues/2656 | 
        
| 21:47 | 
     | 
pdurbin | 
getting warmer anyway :) |