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Message
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12:57 pdurbin
bmckinney: mornin'! How long past 3 did the meeting go yesterday? Sorry I had to duck out.
13:06 bmckinney
pdurbin: good! mostly general discussions.
13:07 pdurbin
bmckinney: at the moment I'm working on https://github.com/CenterForOpenScience/osf.io/pull/5344 but I hope to get back to your stuff soon.
13:08 bmckinney
cool!
13:09 pdurbin
jeffspies____: I'm planning on replying to mfraezz soon
13:09 pdurbin
bmckinney: yeah, it'll be nice having more than one production installation of Dataverse integrated with OSF.
13:13 pdurbin
bmckinney: I definitely learned some new stuff in that meeting, especially the plans regarding dataset mode. Interesting that "Streaming" mode is seen as more of an add-on than a true mode.
13:36 donsizemore joined #dataverse
13:36 donsizemore
@pdurbin knock knock?
13:38 pdurbin
donsizemore: hi! Uh oh, I haven't checked our internal ticket tracker in a while.
13:38 * pdurbin
checks
13:38 donsizemore
@pdurbin: no internal ticket. Jon's putting together his Norway Dataverse demo, and we're curious if you've seen this behavior before (vanilla 4.2.3 Dataverse)
13:38 pdurbin
shoot
13:39 donsizemore
@pdurbin: I've got a note in to the guy running the Kubernetes instance to have him bump 4.2.3 to 4.3.1 because he's using my Dataverse-Ansible stuff to do it, so it should just be a git pull depending on how much he had to customize it for Kubernetes
13:39 pdurbin
sweet!
13:40 donsizemore
@pdurbin: but jon can publish the root dataverse, create a dataverse, upload files, publish said dataverse and files, and then they don't show up on the homepage where he (and sophia) are expecting them
13:40 donsizemore
@pdurbin: we don't have SSH access to look in the glassfish logs
13:40 pdurbin
cwillis was here talking about his docker stuff not long ago: http://irclog.iq.harvard.edu/dataverse/2016-03-28
13:42 pdurbin
donsizemore: my money is on requestHeaderSize needing to be added to Solr's jetty.xml: http://guides.dataverse.org/en/4.3.1/installation/config.html#jetty-xml
13:42 pdurbin
"Without this requestHeaderSize line in place, which increases the default size, it will appear that no data has been added to your Dataverse installation and WARN org.eclipse.jetty.http.HttpParser – HttpParser Full for /127.0.0.1:8983 will appear in the Solr log."
13:44 donsizemore
@pdurbin many thanks. i'll add that to dataverse-ansible
13:44 pdurbin
sweet
13:45 pdurbin
donsizemore: please lemme know if it fixes it
13:45 donsizemore
@pdurbin: also, expect some noise from us in your internal ticket tracker. Now that Shibboleth accounts are working, Thu-Mai is full speed ahead on cleaning up our non-contributing users and unused Dataverses to upgrade us to 4.3
13:45 pdurbin
check
13:45 donsizemore
@pdurbin (hence my whining about Postgres versions)
13:46 pdurbin
heh. yeah, I saw your comments on https://github.com/IQSS/dataverse/issues/3125
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15:29 cwillis
Hello -- following up on a question from dsizemore
15:31 cwillis
I'm working with our (NDS) Docker-based install of Dataverse 4.2.3 and seeing an error indexing in Solr: "Server refused connection at: http://localhost:8983/solr ". I've set :SolrHostColonPort to the correct IP /Port, but seems it isn't being recognized
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15:56 pdurbin
cwillis: hi! What do you get from `curl http://localhost:8080/api/admin/settings/:SolrHostColonPort `?
15:58 cwillis
pdurbin: Thanks for your help. {"status":"OK","data":{"message":"10.0.0.67:8983"}} -- which is the correct IP for solr.
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16:12 pdurbin
cwillis: weird. Does it work with a hostname? (Shouldn't matter)
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16:15 cwillis
pdurbin: No, I tried. I'm setting :SolrHostColonPort via curl after the war is deployed. I could also try setting it directly in Postgres earlier.
16:18 pdurbin
cwillis: you might need to stop and start glassfish
16:21 cwillis
pdurbin: That might be a challenge with the Docker container, since glassfish is the primary processing restarting it will likely terminate the container. Just curious -- what would the restart do? The only think I can think is the setting value is somehow cached.
16:21 cwillis
(wow, strange typos, sorry)
16:22 pdurbin
It used to be you could change this on the fly but I bet it now requires a glassfish restart (confirmed on my laptop just now) ever since we merged https://github.com/IQSS/dataverse/pull/2713
16:23 cwillis
OK, thank you.
16:24 pdurbin
I'll add a note to https://github.com/IQSS/dataverse/issues/2944
16:24 pdurbin
added "changing `:SolrHostColonPort` requires a Glassfish restart"
16:25 pdurbin
cwillis: thanks for catching this
16:25 cwillis
Thanks for your help.
16:25 pdurbin
cwillis: you got it working?
16:28 cwillis
Not yet -- the restart is a problem for me. I'm going to try direct insert into Postgres during initial configuration and see if it works.
16:32 pdurbin
cwillis: oh, sure. That should work fine. It goes in the "setting" table: http://phoenix.dataverse.org/schemaspy/latest/tables/setting.html
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17:15 cwillis
pdurbin: Inserting the setting prior to startup surprisingly didn't work, but restarting glassfish did.
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17:40 pdurbin
cwillis: huh. should work. weird. I'm glad restarting glassfish worked though
17:58 pdurbin
pameyer: did you see any of the chatter about a task list? A Google Doc spreadsheet to help us figure out level of effort.
17:59 pameyer
I did see some of it
18:00 pdurbin
Eleni made a template for us to use.
18:00 pdurbin
and we can look at what was done for the widgets project
18:02 pameyer
cool
18:04 pdurbin
pameyer: when do you and bmckinney want a level of effort number by?
18:04 pdurbin
(expressed in weeks, looks like)
18:08 pameyer
I think the plan is to meet about that wed
18:09 pdurbin
pameyer: provide the estimate by wed?! We'd better get started on the task list!
18:10 pameyer
I've got workshop stuff Sun-Tue, and prep today
18:11 bmckinney
gotcha, i asked eleni to cancel for next week - too many conflicts with various people
18:11 bmckinney
i'm hoping we can plan some things out on google docs in the meantime
18:16 pdurbin
bmckinney: I'll need time from pameyer to work on a task list for our project before we can provide an estimate
18:25 pameyer
dependency graphs - not just for algorithms anymore
18:26 pdurbin
:)
18:29 bmckinney
pdurbin: sounds good, thanks
18:29 pdurbin
bmckinney: sure. Are you planning on creating task lists too?
18:30 bmckinney
pdurbin: yep
18:30 pdurbin
awesome
18:31 bmckinney
like i mentioned earlier, we are going to use smartsheets or similar
18:31 pdurbin
bmckinney: not Eleni's task list template?
18:33 bmckinney
pdurbin: we'll offer it as an option to our PI on Monday
18:33 pdurbin
ok :)
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18:48 pdurbin
pameyer bmckinney: would you be able to look at the widgets task list example before then?
18:51 bmckinney
pdurbin: you bet
18:51 pdurbin
great, because that's what I've been asked to use as a guide
19:08 pameyer
is there a link to the widgets task list somewhere?
19:09 pdurbin
pameyer: huh, there used to be links from http://dataverse.org/releases-roadmap
19:19 pdurbin
pameyer: I just emailed a link to you an bmckinney. I'm not sure if it's supposed to be public so I didn't want to link it here.
19:27 pdurbin
and*
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19:31 pameyer
pdurbin: great; I'll check it out
19:32 pdurbin
pameyer: feedback is very welcome
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20:26 pdurbin
lakoepni: hi. welcome
20:26 lakoepni
Hello
20:28 lakoepni
I had a question about the Sword API
20:29 lakoepni
When adding a dataset, does it only allow adding the list of 15 or so "dcterms" listed in the documentation?
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20:36 pdurbin
lakoepni: right. But there's a non-SWORD way. http://guides.dataverse.org/en/4.3.1/api/sword.html says "As a profile of AtomPub, XML is used throughout SWORD. As of Dataverse 4.0 datasets can also be created via JSON using the “native” API ."
20:37 pdurbin
And by using the native API you can edit *all* metadata fields from *all* metadata blocks.
20:42 pdurbin
anyway, I gotta run if I'm going to get my daughter to soccer practice on time
20:42 pdurbin
have a good weekend, all!
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20:44 lakoepni
Thanks!
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