Time
S
Nick
Message
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14:47 Thali_UM
In NetBeans marks errors in some java files, and according to the error message that throws is for an array.
14:48 pameyer
Thali_UM: is netbeans using java 8?
14:49 donsizemore joined #dataverse
14:49 Thali_UM
yes
14:50 pameyer
compile errors, test errors, warnings?
14:50 pameyer
donsizemore: have you been ok for file descriptors?
14:50 donsizemore
@pdurbin morning. want a PR connected to #4709 to update the postgres instructions in the docs? you all can accept it should you standardize on 9.6, discard it if not
14:51 pdurbin
donsizemore: sure! I'll assign the issue to you. Thanks!
14:51 pdurbin
donsizemore: would you be able to update vagrant as well?
14:51 donsizemore
@pameyer the 3.10.0-862.3.2 kernel update reset us back to 1858. we were up nearly 12,000
14:52 donsizemore
@pdurbin i'll be happy to. sorry i haven't been around much lately... busy few months
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14:56 pdurbin
donsizemore: great! I also mentioned docker stuff in this comment I just made. And how we can help: https://github.com/IQSS/dataverse/issues/4709#issuecomment-393194277
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15:05 Thali_UM
http://img.fenixzone.net/i/Le9Q7BS.png
15:06 Thali_UM
Does that indicate that I need a plugin?
15:12 Thali_UM
I've already run it on Ubuntu, MAC and in the terminal.
15:13 Thali_UM
I do not know what I'm doing wrong
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15:15 pameyer
is looks to me like your maven installation is having a problem
15:15 pameyer
maven tries to download lots of things, and can sometimes fail and end up in an inconsistent state
15:16 pameyer
usually, when it does that, I rename my ~/.m2 directory and try again - but that doesn't always work
15:25 Thali_UM
thank you pameyer
15:30 Thali_UM
the version of postgresql is 9.3
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15:34 donsizemore
@pdurbin should I roll the solr ulimit dealy into vagrant with #4709 or should that go in another issue for granularity?
15:39 pdurbin
donsizemore: you're welcome to fix up anything in vagrant while you're in there
15:40 donsizemore
@pdurbin 10/4 (and currently testing the updated setup.sh)
15:41 pdurbin
donsizemore: awesome. thanks
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17:32 Thali_UM
already probe maven and it works fine, but I keep checking the errors with the dataverse project.
17:32 Thali_UM
From the terminal do I have to run glassfish?
17:35 pdurbin
Which step are you on at http://guides.dataverse.org/en/4.8.6/developers/dev-environment.html ?
17:35 Thali_UM
I must apply
17:35 Thali_UM
git clone https://github.com/Thalia25/dataverse.git
17:35 Thali_UM
or
17:35 Thali_UM
git clone git
17:36 pdurbin
git clone git
17:37 Thali_UM
http://guides.dataverse.org/en/4.8.4/developers/dev-environment.html#building-the-war-file
17:37 Thali_UM
the terminal sends the following message: permission denied
17:38 Thali_UM
Cloning into 'dataverse'...
17:38 Thali_UM
Permission denied (publickey).
17:38 Thali_UM
fatal: Could not read from remote repository.
17:38 Thali_UM
Please make sure you have the correct access rights
17:38 Thali_UM
and the repository exists.
17:38 pameyer
sounds like you need to setup ssh keys for your github account
17:39 pameyer
https://help.github.com/articles/connecting-to-github-with-ssh/
17:40 pameyer
using https should work, but that would mean you wouldn't be able to push your changes to github
17:42 pdurbin
Thali_UM: you should set up ssh keys
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17:59 Thali_UM
I using already with git clone git
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18:04 Thali_UM
I'm still looking for a way to solve the error that generates me when running the project, I can not execute that step correctly
18:05 Thali_UM
http://guides.dataverse.org/en/4.8.4/developers/dev-environment.html#building-the-war-file
18:29 donsizemore
@pdurbin so the postgres version swap seems to have gone okay, but 'vagrant up' is producing a dataverse which throws a javascript error on homepage load. not much in the logs
19:00 donsizemore
@pdurbin aaaand, a rebase fixed things up. i blame me. will touch up the docs next.
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19:05 Thali_UM
Now It send me the next message: java.io .IOException: Unable to delete file:\tmp\files\tmp\dataset\DataFile
19:07 pameyer
Thali_UM: this isn't windows, right? the "\" in that error makes me wonder
19:11 Thali_UM
Yes is Windows
19:11 Thali_UM
this isn't windows, right? the "\" in that error makes me wonder
19:11 Thali_UM
pameyer
19:12 Thali_UM
I need an answer for a question
19:13 Thali_UM
When I run the project, NetBeans ask me about server glassfish, Have i select a server and start glassfish or ignore it?
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19:17 pameyer
Thali_UM: I'm not sure what happens when you try to build on windows
19:18 pameyer
I don't have a good answer for netbeans and glassfish - I don't use netbeans for dataverse work (and haven't used netbeans at all for a few years now)
19:19 pameyer
my usual approach has been to build the war file with maven, and then deploy to a separate glassfish server (usually in a vm or container); hooking up a debugger/profiler as needed
19:21 pameyer
@donsizemore: do you know offhand if vagrant uses any harvesting timers?
19:21 pameyer
4721 was fast :)
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19:58 pdurbin
pameyer: yep. I just added a couple commits. Can I assign it to you to work on docker-aio?
19:58 pameyer
pdurbin: sure, but I might not get to it today
19:59 pameyer
I was asking about timers because of the jdbc drivers in the installer
20:02 pdurbin
In IRC ? I must have missed it.
20:09 pameyer
http://irclog.iq.harvard.edu/dataverse/2018-05-30#i_68115
20:12 pdurbin
oh oh, thanks
20:13 pdurbin
I don't think harvesting timers are exercised by Vagrant but I expect them to work if you schedule some harvests.
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21:43 pameyer
@donsizemore: do you know offhand if dataverse-ansible requires the db account to be admin on postgres? I remember (possibly incorrectly) talking about this in the past in the context of the normal installer
21:44 donsizemore
@pameyer ansible does the dirty work now
21:44 donsizemore
- name: create glassfish postgres database postgresql_db: name={{ dataverse.db }} - name: create glassfish postgres user, set permissions postgresql_user: db={{ dataverse.db }} name={{ dataverse.dbuser }} password={{ dataverse.dbpass }} role_attr_flags=NOSUPERUSER,CREATEDB,CREATEROLE,INHERIT,LOGIN
21:44 donsizemore
^^ i promise i'm not using an AOL mail client
21:44 pameyer
:)
21:45 pameyer
thanks - I'd been thinking about seeing if I could get the normal installer to work with that role; but that might be a bad idea if it already sorts out the admin/non-admin stuff
21:46 pameyer
… hmm; CREATEDB *should* be enough though
21:51 pameyer
nope - CREATEDB isn't
21:55 pdurbin
pameyer: `CREATE ROLE dvnapp UNENCRYPTED PASSWORD 'secret' SUPERUSER CREATEDB CREATEROLE INHERIT LOGIN` according to https://github.com/IQSS/dataverse/blob/v4.8.6/scripts/deploy/phoenix.dataverse.org/rebuild#L11
21:56 pameyer
well, changing the NOSUPERUSER to SUPERUSER in dataverse-ansible wasn't enough
21:56 pameyer
figured it was worth a quick look
21:57 pameyer
pdurbin: normal install is also working in docker-aio with postgres 9.6; that didn't need another commit (so no commit message for it)
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