Time
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Nick
Message
02:18 andrewSC joined #dataverse
02:57 dataverse-user joined #dataverse
02:57 dataverse-user
tes
09:48 dataverse-user joined #dataverse
12:28 Richard_Valdivia joined #dataverse
12:51 pdurbin
hi Richard_Valdivia
13:00 donsizemore joined #dataverse
13:48 pdurbin
mornin' donsizemore
14:20 pdurbin
donsizemore: I'm losing my mind a bit with error handling in Python. Especially due to all the constraits I've put on myself.
14:30 donsizemore
@pdurbin rules are made for breaking!
14:30 pdurbin
Here are my current constraints:
14:30 pdurbin
- Works on Python 2 and Python 3
14:30 pdurbin
- No external dependencies. Use the batteries included.
14:31 pdurbin
Do you care about either of these things?
14:42 donsizemore
is this for dataverse-metrics?
14:42 pdurbin
yeah
14:43 donsizemore
are non-standard modules considered an external dependency?
14:43 pdurbin
yes
14:43 donsizemore
i wouldn't bat an eyelash at installing any python module...
14:44 donsizemore
particularly if there's a packaged version in centos/epel (and nearly everything is packaged in debian/ubuntu land)
14:44 donsizemore
and any system which uses python2 can easily install python3, and vice versa
14:45 donsizemore
as UNC's head librarian would say, you do YOU
14:46 donsizemore
a venv is probably the only thing you could do to make newbies groan
14:53 pdurbin
yeah
14:54 pdurbin
thanks
17:16 donsizemore joined #dataverse
18:34 donsizemore joined #dataverse
19:09 donsizemore
@pdurbin i just re-ran through the dataverse installation docs manually and have about 6 PRs to make to the prerequisites document. would you prefer granularity or simplicity?
19:13 pdurbin
donsizemore: hmm, I'm thinking a single pull request but I'm open to whatever. Heads up that Oliver was taking a swing at rewriting it too. And he made a little diagram I can point you to if you'd like.
19:13 donsizemore
ah, i'll hold off on then. mine were just minor corrections/suggestions/flow
19:13 pdurbin
did you see his diagram?
19:15 pdurbin
donsizemore: did you jot down the 6 things? If not, please feel free to create an issue for now.
19:16 donsizemore
i'll be in a hospital waiting room most of tomorrow, it would give me something to do. i'll send them in and oliver can incorporate if he likes
19:16 pdurbin
sounds perfect
19:16 pdurbin
here's his diagram. I'm sure he'd love feedback: http://irclog.iq.harvard.edu/dataverse/2019-05-15#i_93613
19:17 pdurbin
donsizemore: I tried to request a review from you for https://github.com/IQSS/dataverse-metrics/pull/21 but I guess I'd need to add you to a team first.
19:17 donsizemore
oh, i remember that. i missed his rewriting the install docs tho
19:19 donsizemore
#21 looks good to me at a glance though i think you're worrying too much about dependencies. it's python =)
19:19 pdurbin
probably
19:19 pdurbin
:)
19:20 pdurbin
Good luck at the hospital. I just saw a tweet about Thu-Mai giving a talk on the other side of the world. And Jon, earlier.
20:40 pdurbin
donsizemore: you are very welcome to take a look at this one too: https://github.com/IQSS/dataverse-metrics/pull/23
20:41 pdurbin
Oh and speaking of pull requests, I'm very excited about who opened this one: https://github.com/IQSS/dataverse/pull/5894 :)
21:04 donsizemore
@pdurbin does that mean i should test payara5 again?
21:17 pdurbin
donsizemore: heh. Let's let the dust settle. Also, should I spin up my own Jenkins server and try docker-aio on it?
21:18 donsizemore
@pdurbin jenkins isn't really in the picture... just testing on that host
21:19 pdurbin
Right but I want to understand all the CI stuff. I'm basically talking about https://github.com/IQSS/dataverse-jenkins/issues/1
21:20 donsizemore
@pdurbin ah, well you're welcome to
21:20 pdurbin
donsizemore: whoa! I just saw https://github.com/IQSS/dataverse/issues/2628#issuecomment-497483232 ... maybe you **should** try Payara 5.192 if you're able.
21:21 donsizemore
yes yes he deployed!
21:21 pdurbin
Poor Oliver is the only one on https://github.com/IQSS/dataverse/issues/4172 . Would you like to be co-assigned. :)
21:23 pdurbin
Speaking of Oliver, it looks like he found https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2019-11245 ... check out https://github.com/kubernetes/minikube/issues/4369
21:24 donsizemore
@pdurbin i mean, count me as an interested participant
21:28 pdurbin_m joined #dataverse
21:29 pdurbin_m
donsizemore: I tried using a payara zipurl but I got this: https://github.com/IQSS/dataverse-ansible/issues/68
21:31 donsizemore
oh, i saw that. i haven't hit that bug
22:07 pdurbin
I was trying to use this as the zipurl: https://s3-eu-west-1.amazonaws.com/payara.fish/Payara+Downloads/5.192/payara-5.192.zip
22:07 pdurbin
I'm not sure if there's a more stable URL .
22:28 poikilotherm joined #dataverse
22:29 poikilotherm
Hey guys, anyone still around?
22:30 pdurbin
poikilotherm: congrats on your CVE
22:30 poikilotherm
pdurbin: thx for the flowers, but that wasn't me :-D
22:30 pdurbin
huh, you opened the issue
22:30 poikilotherm
Not in upstream...
22:30 poikilotherm
Minikube is just suffering from the CVE on K8s 1.14.2
22:31 pdurbin
oh, this? https://github.com/kubernetes/kubernetes/issues/78308
22:32 poikilotherm
Yes
22:33 poikilotherm
I linked to it from the docs
22:33 poikilotherm
And added a link to it from the issue now, too
22:33 poikilotherm
Although I added some value to the bug, as the opener only described it for restarting containers...
22:34 poikilotherm
So I am part of it, but not the origin ;-)
22:35 pdurbin
Ok, I'd like to try payara-5.192.zip but I'm blocked by https://github.com/IQSS/dataverse-ansible/issues/68
22:39 poikilotherm
Meh
22:39 poikilotherm
Did you see https://github.com/IQSS/dataverse-kubernetes/issues/63
22:40 poikilotherm
I am working on this... :-D
22:40 poikilotherm
We had a holiday here in Germany today, so I did not continue where I left yesterday night
22:41 poikilotherm
And tomorrow is a day off, too.
22:41 poikilotherm
I will try to look into this to show people sth. on Monday... ;-)
22:41 poikilotherm
(Dataverse DE meeting in Göttingen)
22:41 pdurbin
It was Harvard graduation today (which is called "commencement" for some reason), so we had beer and pizza in the yard, like usual. :)
22:41 poikilotherm
Sounds good ;_)
22:42 pdurbin
Angela Merkel gave a speech
22:42 poikilotherm
Oh wow! At Harvard?
22:42 pdurbin
yeah
22:42 poikilotherm
Must have been a very important grad day
22:43 pdurbin
I did see that issue 63. Very cool.
22:43 poikilotherm
Or is it normal to have foreign head of states to talk at Harvard on grad day
22:44 poikilotherm
?
22:44 pdurbin
one year it was J K Rowling
22:44 poikilotherm
:-D
22:44 poikilotherm
Cool
22:45 pdurbin
oprah
22:45 pdurbin
https://en.wikipedia.org/wiki/History_and_traditions_of_Harvard_commencements#Commencement_speakers
22:45 poikilotherm
BTW: about Steve making pull request and more: how awesome is that?
22:45 pdurbin
so awesome, no response in #glassfish though :)
22:46 poikilotherm
And it is really good news that progress is possible
22:46 pdurbin
well, the war file deployed, that's good
22:46 pdurbin
but does Dataverse work? :)
22:47 poikilotherm
Back in https://github.com/IQSS/dataverse/issues/4248#issuecomment-341571761 it sounded like things are borked up and it would be hard to achieve the goal
22:47 poikilotherm
Hmm
22:47 poikilotherm
I am not sure how to read Steves statement
22:48 poikilotherm
He at least could login
22:48 pdurbin
to Dataverse? I wasn't sure what he meant
22:48 poikilotherm
Maybe Slava could help us here with Selenium testing?
22:48 pdurbin
or... cypress! did you see the animated gif?
22:49 poikilotherm
Quote from Steve: "I could deploy the war and login on Payara 5.192 running on JDK 11."
22:49 pdurbin
cypress (alternative to selnium) animated gif: https://github.com/IQSS/dataverse/issues/5846#issuecomment-497469796
22:49 poikilotherm
I read that like he deployed and used his browser to visit the deployed app. He could login
22:49 poikilotherm
Uh nice!
22:49 poikilotherm
Didn't see that yet
22:49 poikilotherm
(Digging through the list of notifications... ;-) )
22:51 poikilotherm
Looks promising. At least it would be a start. Altough no cross browser testing :-/
22:52 pdurbin
I'll take anything. :)
22:52 poikilotherm
:-D
22:53 pdurbin
ah, found an ansible workaround
22:54 poikilotherm
Great :-)
22:55 pdurbin
but Steve's branch hasn't been merged yet so I need to spin up his branch
22:57 pdurbin
giving this a shot: ec2-create-instance.sh -g main.yml -r https://github.com/smillidge/dataverse.git -b 5893-make-flyway-ejb-valid
22:58 pdurbin
with this tweak to the ec2 create script: https://github.com/IQSS/dataverse-ansible/issues/68#issuecomment-497514031
22:59 poikilotherm
Looks like I will need to build sth. clever to get other WARs inside to test this...
23:00 pdurbin
It would be awesome to be able to use your stuff with arbitrary forks and branches.
23:01 poikilotherm
I kind of had the plan to use a maven plugin...
23:01 poikilotherm
And reuse my upstream images
23:01 poikilotherm
This would at least work for the WAR file
23:02 poikilotherm
For "the rest", like the TSV/JSON /... one would need to evaluate what can be done with things like fabric8io/d-m-p
23:02 pdurbin
weird. "Command start-domain failed"
23:03 poikilotherm
What would you prefer? Using a maven command to build the image? Build the WAR and everything inside a multi stage docker build? Some fancy script to roll in the WAR?
23:04 poikilotherm
Or maybe a maven plugin building the image and pushing it to kubernetes?
23:33 pdurbin
poikilotherm: whatever works, honestly. I'm not picky.
23:33 poikilotherm
:-D
23:33 pdurbin
You should see me hacking on https://github.com/IQSS/dataverse-metrics/pull/23
23:33 pdurbin
screenshots! :)
23:34 pdurbin
But you should be getting to bed.
23:35 pdurbin
sorry I didn't go see angela merkel. I'm sure it was recorded
23:37 poikilotherm
:-D
23:37 poikilotherm
Yes I should...
23:38 poikilotherm
Looking into how to create a simple registry for development purposes
23:39 poikilotherm
Luckily, we are not the first people discovering Kubernetes for local dev, too
